Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934762.1_cds_XP_016480771.1_72183
CDS Infomation

[gene=LOC107801880] [db_xref=GeneID:107801880] [protein=cyclase-associated protein 1-like] [protein_id=XP_016480771.1] [location=complement(join(166055..166141,167042..167185,167296..167352,167453..167508,167615..167724,167808..167955,168037..168346,171347..171411,171483..171651,172611..172889))] [gbkey=CDS]
Sequence

ATGGATGAGGAGTTGATACAGCGATTGGAGTCCGCCGTCACACGGCTTGAGGCACTGTCA
GCCGGCGGCTTCAGCGGAGGAGTTTCGCCGGGGGAGGGCGAAGCGGCGGCGGTTTTAGAT
CCGTCGATTATTGCCTTTGACGATCTGAGGTCTCAGTTTGCCGGGAGAGTTCGAAGTGCT
GCAGAGAAGATTGGAGGACGAGTTTTGGATGTGACAAAGATTGTTGAGGAGGCTTTTGAA
GCTCAGCGTGAACTACTTATCAAAATCAAGCAGACTCAGAAACCTGACATGTCTGGTTTG
GCTGAATTTCTTAAGCCTTTGAATGATGTGATTGTGAAAGCTACAAAAATGATAGAAGGA
CGGCGACCTGATTTCTTCAATCACTTGAAGGCTGCTGTTGATAGTCTGACGGCCCTGGCA
TGGATAGCTTACACTGGAAAGGATTGTGGTTTGAGTATGCCTATTGCACACGTGGAAGAA
AGTTGGCAGATGGCTGAATTTTACAATAACAAGGTCCTTGTGGAGTTCCGAAACAAAGAC
TCGAATCATGTTGAATGGGCAAAAGCCTTGAAAGAGCTTTATCTCCCTGGCTTGCGAGAT
TATGTTAAGAGTCACTATCCATTGGGTCCTGTATGGAGTGCTACAGGGAAAGTTGCTGTA
TCTGCACCACCAAAAGCTCCCACACCAAGTGCTCCCATGCCTCCTCCTCCACCGCCAGCT
TCTCTGTTGAGCTCTGAATCTCCCCAGGCTTCATCATCACGTCCAACGAAAGGGATGGCA
GCTGTTTTTGATGAAATTAATTCGGGAAAGCCAGTGACTTCTGGATTGAGAAAGGTGACA
GATGATATGAAGACAAAGAACCGGGCAGACAGAACTGGTGTCATTAGTGCAGGAGGAAAG
GAAGGTCGTGTTAGCTCACCCTCTTTCTCTAAAGCTGGACCTCCGAAATTGGAGCTTCAG
ATGGGTCGTAAATGGGTGGTCGAGAATCATATAGGAAAAAAGAATCTAGTCATTGATGAT
TGCGATGCAAAGCAATCTGTTTATATTTTTGGTTGCAAAGATTCAGTTCTGCAGATCCAA
GGGAAAGTCAACAACATAACAGTTGATAAGTGCACTAAAATGGGAGTTGTATTCATGGAT
GTTGTGGCAGCTTGTGAGGTTGTCAACTGCAATGGTGTGGAGGTGCAATGTCAGGGTTCA
GCACCAACAATTTCAGTCGATAATACAACTGGATGCCAGTTGTACTTGAGCAATGGTTCT
TTGGAGACTTCCATTACAACAGCCAAGTCAAGTGAAATCAATGTTTTGGTTCCTGGTGCT
GGACCTGATAGTGATTGGGGTGAGCATGCTTTGCCGCAGCAATTTTCTCATGTATACAAG
GATGGCCAATTTGTGACTACACCTGTCTCCCATTCTGGAGGTTAA

Peptide Sequence

PEP ID

XP_016480771.1
PEP Infomation

PREDICTED: cyclase-associated protein 1-like [Nicotiana tabacum]
Sequence

MDEELIQRLESAVTRLEALSAGGFSGGVSPGEGEAAAVLDPSIIAFDDLRSQFAGRVRSA
AEKIGGRVLDVTKIVEEAFEAQRELLIKIKQTQKPDMSGLAEFLKPLNDVIVKATKMIEG
RRPDFFNHLKAAVDSLTALAWIAYTGKDCGLSMPIAHVEESWQMAEFYNNKVLVEFRNKD
SNHVEWAKALKELYLPGLRDYVKSHYPLGPVWSATGKVAVSAPPKAPTPSAPMPPPPPPA
SLLSSESPQASSSRPTKGMAAVFDEINSGKPVTSGLRKVTDDMKTKNRADRTGVISAGGK
EGRVSSPSFSKAGPPKLELQMGRKWVVENHIGKKNLVIDDCDAKQSVYIFGCKDSVLQIQ
GKVNNITVDKCTKMGVVFMDVVAACEVVNCNGVEVQCQGSAPTISVDNTTGCQLYLSNGS
LETSITTAKSSEINVLVPGAGPDSDWGEHALPQQFSHVYKDGQFVTTPVSHSGG

Transcript Sequence

Gene sequence data has not been registered.